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Simulation of intracellular delivery through permeabilized multivesicular vesicles
Authors: Shah Sajnin Anna, Shahariar Emon, Mohammad Abu Sayem Karal, Md. Asaduzzaman, Shovon Saha, Md. Atikur Rahman, Md Lokman Hossen, Md. Akhtaruzzaman, Md. Khorshed Alam
Publication Date: January, 2026
Journal Name: European Biophysics Journal
Publisher: Springer Nature
Structural, Thermal and Mechanical Analyses of Banana Midrib Fiber Reinforced Polypropylene Composite of Improved Properties
Authors: Md. Al-Amin, M. Hedayet Ullah, Md. Mahtabur Rahman, Md. Khorshed Alam, Mohammad Jellur Rahman
Publication Date: September 2025
Journal Name: Journal of Polymer Research
Publisher: Springer Nature
Optimizing electroporation via pulse modulation: a molecular dynamics study
Authors: Shahariar Emon, Al Amin, Md. Hossain, Shovon Saha, Md. Asaduzzaman, Md Lokman Hossen, Mohammad Abu Sayem Karal, Hiromitsu Takaba, Md. Khorshed Alam
Publication Date: 21 August 2025
Journal Name: European Biophysics Journal
Publisher: Springer Nature (2025)
Environmental and Socio-Economic Impacts of Coal-Fired Payra Thermal Power Plant
Authors: MD. ASADUZZAMAN, MD. ALI HAYDER, MD. RASEL HOSEN, SHAONUR RAHMAN, NUSRAT JAHAN SIFA, MUKTADIR RAHMAN, MD. KHORSHED ALAM
Publication Date: 2025
Journal Name: Bangladesh Journal of Physics
Publisher: Bangladesh Physical Society
Understanding the Decomposition Mechanism of Li2O2 in the Cathode of Li-O2 Battery with First Principles Molecular Dynamics
Authors: M.K. Alam, S. Emona and H. Takababa.
Publication Date: December 2025
Journal Name: Phys. Chem. Res.
Publisher: Iranian Chemical Society
MOLECULAR TRANSPORT BY VARYING THE SIZE OF THE NANOPORE IN THE MEMBRANE OF GUV USING SIMULATION
Authors: Thuhedur Rahman, Md. Asaduzzaman, Shahariar Emon, Md. Imran Hossain, Md. Saif Ishtiaque, Mohammad Abu Sayem Karal, Md. Masum Billah, Hiromitsu Takaba, Md. Khorshed Alam
Publication Date: 2025
Journal Name: Journal of Biogolical Research
Publisher: ACS
Computational Simulation Study of Molecular Transport in Various Types of Unilamellar Vesicles through Multiple Electroporated Nanopores
Authors: Md. Khorshed Alam, Md. Asaduzzamana, Shovon Saha, Md. Masud Parvez, Md. Emamul Ehosan, and Sk. Abdul Kader Arafin
Publication Date: 2024
Journal Name: Journal of the Bangladesh Chemical Society
Publisher: JBCS
Molecular transport through nano‑sized multipores of lipid vesicles: a COMSOL simulation study
Authors: Md. Asaduzzaman · Shahariar Emon · Md. Saif Ishtiaque· Md. Imran Hossain· Mahammad Abu Sayem Karal · Md. Masum Billah · Hiromitsu Takaba· Md. Khorshed Alam
Publication Date: 30 March 2025
Journal Name: European Biophysics Journal
Publisher: Springer
Molecular dynamics of electroporation and quantitative analysis of molecular transport
Authors: Shahariar Emon· Sadman Sakib · Niloy Bardhan· Shovon Saha· Md. Asaduzzaman· Md. Khorshed Alam
Publication Date: 25 April 2025
Journal Name: Journal of Biological Physics
Publisher: Springer
Conformational effect of Pt2Ru3 nanoparticle on surface coverage of CO/H2 by materials informatics-integrated computational method
Authors: Md. Khorshed Alam; Shuhei Saito; Fumiya Hirosawa; Masaya Miyagawa; H.Takaba
Publication Date: 2022
Journal Name: Material Research Communication
Publisher: CAMBRIDGE UNIVERSITY PRESS
Simulation and Numerical Scheme of Molecular Transport Due to Dielectrophoresis and Electroporation in a Giant Unilamellar Vesicle
Authors: S. Saha, M. S. Ishtiaque, M. I. Hossain and *M. K. Alam,
Publication Date: 23 Feb. 2023
Journal Name: IEEE Explore
Publisher: IEEE
Simulation and Intelligent Data Mining of Molecular Transport Through Multiple Nanopores in an Electroporated Giant Unilamella
Authors: S. Saha, M. S. Ishtiaque, M. A. S. Karal and M. K. Alam
Publication Date: 21-23 Sep. 2023
Journal Name: IEEE Explore
Publisher: IEEE
Simulation and Numerical Analysis of Biomacromolecules Transportation Due to Electroporation through Numerous Nanopores in Multiple Unilamellar Vesicles
Authors: S. Saha, M. A. Rahman, M. Asaduzzaman and M. K. Alam
Publication Date: 13-15 Dec. 2023
Journal Name: IEEE Explore
Publisher: IEEE
Adsorption of CO on Pt3, Pd3, Pd Doped Pt2 and Pt Doped Pd3 Clusters: A Density Functional Study
Authors: Md. Asaduzzaman, Apu Kumar Ghosh and Md. Khorshed Alam
Publication Date: 2023
Journal Name: DIU Journal of Science and Technology
Publisher: DIU
Study of Molecular Transport Through Nano-Sized Asymmetric Multipores in the Membrane of a Giant Unilamellar Vesicle Using COMSOL Simulation
Authors: Md. Asaduzzaman, Sagor Das, Shovon Saha, Shahriar Emon, and Md. Khorshed Alam
Publication Date: 2024
Journal Name: Bangladesh Journal of Physics
Publisher: Bangladesh Physical Society
Exploring Molecular Transport in Single Nanopores: Impact of Probe Size Variation in Various-Sized Giant Unilamellar Vesicles (GUVs) Using COMSOL Simulation
Authors: Md. Asaduzzaman, Md. F. Hossain, T. Rahman, Md. Imran Hossain, Md. Saif Ishtiaque, Md. Khorshed Alam
Publication Date: 2024
Journal Name: Barishal University Journal of Science and Engineering
Publisher: Barishal University
Theoretical Insight of Excited States at Large Scale Organic/Organic Interface for Designing Novel Organic Electronic Devices
Authors: Md. Khorshed Alam* and Md. Masud Parvez
Publication Date: 2023
Journal Name: Journal of Science and Technology Research
Publisher: Ministry of Science and Technology
Theoretical Study of Irreversible Electroporation of Tissue for Effective Intracellular Delivery of Biomacromolecules
Authors: Md. Khorshed Alam, Jannatun Naher Nony, Md. Asaduzzaman, and Shovon Saha
Publication Date: 2024
Journal Name: Barishal University Journal of Science and Engineering
Publisher: Barishal University
Computational Simulation Study of Molecular Transport in Various Types of Unilamellar Vesicles through Multiple Electroporated Nanopores
Authors: Md. Khorshed Alam, Md. Asaduzzaman, Shovon Saha, Md. Masud Parvez, Md. Emamul Ehosan, and Sk. Abdul Kader Arafin
Publication Date: 2024
Journal Name: Journal of Bangladesh Chemical Society
Publisher: Bangladesh Chemical Society
Effect of nitrogen incorporation and ultraviolet irradiation on interactions of perfluoropolyether with carbon surfaces using quantum chemical study
Authors: Md. Khorshed Alam, Md. Alauddina, Alamgir Kabirc, and Hedong Zhang
Publication Date: 2020
Journal Name: Journal of Bangladesh Chemical Society
Publisher: Bangladesh Chemical Society
STRUCTURAL ANALYSES OF [LI SALT+TRIGLYME)] AND IONIC TRANSPORT IN LI-AIR BATTERY USING MOLECULAR DYNAMICS SIMULATION
Authors: MD. KHORSHED ALAM, WATARU YAMAMOTO, AND HIROMITSU TAKABA
Publication Date: 2020
Journal Name: Bangladesh Journal of Physics
Publisher: Bangladesh Physical Society
Surface Structure and Reduction Processes of Ti doped CeO2: A Ultra Quantum Chemical Molecular Dynamics Study
Authors: Md. Khorshed Alam, Md. Alauddin, R. Nasrin, Md. I. Hossain, Md. S. Ishtiaque, M.A. Islam
Publication Date: 2018
Journal Name: Barishal University Journal
Publisher: Barishal University
GENERATION AND VALIDATION OF A WIMSD-5B MULTIGROUP CONSTANTS LIBRARY BASED ON JENDL-3.3 NUCLEAR DATA
Authors: Rahima Nasrin, S.M.T. Islam, Md. Khorshed Alam
Publication Date: 2018
Journal Name: Barishal University Journal
Publisher: Barishal University
Thousand-atom ab initio calculations of excited states at organic/organic interfaces: toward first-principles investi-gations of charge photogeneration
Authors: T. Fujita, Md. Khorshed Alam, T. Hoshi
Publication Date: 2018
Journal Name: Physical Chemistry Chemical Physics
Publisher: Royal Society of Chemistry
Equilibrium atomic conformation of Pt2Ru3 nanoparticles under gas atmosphere of CO/H2-investigated by density functional theory and Monte Carlo simulation
Authors: Md. Khorshed Alam and H. Takaba
Publication Date: 2018
Journal Name: Material Research Communications
Publisher: CAMBRIDGE UNIVERSITY PRESS
Modelling of equilibrium conformation of Pt2Ru3 nanoparticles using the density functional theory and Monte Carlo simulation and CO Adsorption on the Pt2Ru3 Surface
Authors: Md. Khorshed Alam, S. Saito and H. Takaba
Publication Date: 2017
Journal Name: Journal of Material Research
Publisher: CAMBRIDGE UNIVERSITY PRESS
Crystal and electronic structures of substituted halide perovskites based on density functional calculations and molecular dynamics
Authors: Takaba, Hiromitsu; Shou, Kimura; Md. Khorshed Alam
Publication Date: 2017
Journal Name: Chemical Physics
Publisher: Elsevier
Molecular modeling of OH-transport in poly(aryl-ene ether sulfone ketone)s containing quaternized-ammonio-substituted fluorenyl groups as anion exchange membranes
Authors: H. Takaba, T. Hisabe, T. Shimizu and Md. Khorshed Alam
Publication Date: 2017
Journal Name: Journal of Membrane Science
Publisher: Elsevier
Density Functional Theory Study on the adsorption of H, OH, and CO and coadsorption of CO with H/OH on the Pt2Ru3 surfaces
Authors: Md. Khorshed Alam, S. Saito and H. Takaba
Publication Date: 2016
Journal Name: Journal of Material Research
Publisher: Cambridge University Press
Prospects of Graphene as a Potential Carrier Transport Material in Third Generation Solar Cells
Authors: T. H. Chowdhury, A. Islam, A.K. M. Hasan, M. Arunakumari, S.P. Singh, Md. Khorshed Alam, I. Md. Akhtaruzzaman
Publication Date: 2016
Journal Name: Chemical Record
Publisher: Wiley
Density Functional Theory Study of OH and CO Adsorption on the Pt2Ru3 Surface
Authors: Md. Khorshed Alam and H. Takaba
Publication Date: 2014
Journal Name: ECS Transactions
Publisher: ECS
Stability of Pt-Ru Alloy for Anode Catalyst in PEFC Fuel Cell: A Density Functional Theory Study
Authors: Md. Khorshed Alam and H. Takaba
Publication Date: 2014
Journal Name: ECS Transactions
Publisher: ECS
Dynamics of Deposited Li2O2 on Cathode Surface in Li-O2 Battery by First-Principles Calculation
Authors: W. Yamamoto, Md. Khorshed Alam and H. Takaba
Publication Date: 2014
Journal Name: ECS Transactions
Publisher: ECS
Modelling of transport mechanisms of OH in electrolyte of alkaline fuel cell
Authors: H. Takaba, N. Shimizu, T. Hisabe and Md. Khorshed Alam
Publication Date: 2014
Journal Name: ECS Transactions
Publisher: ECS
Ultraviolet bonding of perfluoropolyethers to carbon surfaces investigated using quantum chemical methods
Authors: Md. Khorshed Alam, Hedong Zhang, Nobuaki Koga and Satoru Iuchi
Publication Date: 2013
Journal Name: Journal of Microsystem Technologies
Publisher: Springer
Surface reduction processes of cerium oxide surfaces by H2 using ultra accelerated quantum chemical molecular dynamic study
Authors: Md. Khorshed Alam, F. Ahmed, R. Miura, A. Suzuki, H. Tsuboi, Endou, H. Takaba, M. Kubo and A. Miyamoto
Publication Date: 2011
Journal Name: Catalysis Today
Publisher: Elsevier
Modeling of hydrogen vacancy for dissociative adsorption of H2 on Pd (1 1 1) surface by a quantum chemical molecular dynamic study
Authors: F. Ahmed, Md. Khorshed Alam, R. Miura, A. Suzuki, H.Tsuboi, N. Hatakeyama, A. Endou, H. Takaba, M. Kubo and A. Miyamoto
Publication Date: 2011
Journal Name: Catalysis Today
Publisher: Elsevier
Study of reduction processes over cerium oxide surfaces with atomic hydrogen using ultra accelerated quantum chemical molecular dynamics
Authors: Md. Khorshed Alam, F. Ahmed, R. Miura, A. Suzuki, H.Tsuboi, N. Hatakeyama, A. Endou, H. Takaba, M. Kubo and A. Miyamoto
Publication Date: 2010
Journal Name: Applied Surface Science
Publisher: Elsevier
Adsorption and dissociation of molecular hydrogen on Pt/CeO2 catalyst in the hydrogen spillover process: A quantum chemical molecular dynamics study
Authors: F. Ahmed, Md. Khorshed Alam, R. Miura, A. Suzuki, H.Tsuboi, N. Hatakeyama, A. Endou, H. Takaba, M. Kubo and A. Miyamoto
Publication Date: 2010
Journal Name: Applied Surface Science
Publisher: Elsevier
Study of Carbon Monoxide Oxidation on CeO2(111) Using Ultra Accelerated Quantum Chemical Molecular Dynamics
Authors: Md. Khorshed Alam, Farouq Ahmed, Katsuyoshi Nakamura, Ai Suzuki, Riadh Sahnoun, Hideyuki Tsuboi, Michihisa Koyama, Nozomu Hatakeyama, Akira Endou, Hiromitsu Takaba, Carlos A. Del Carpio, Momoji Kubo, Akira Miyamoto
Publication Date: 2009
Journal Name: Journal of Physical Chemistry C
Publisher: ACS
Dynamics of Hydrogen Spillover on Pt/γ-Al2O3 Catalyst Surface: A Quantum Chemical Molecular Dynamics Study
Authors: F. Ahmed, Md. K. Alam, A. Suzuki, R. Sahnoun, H.Tsuboi, M. Koyama, N. Hatakeyama, A. Endou, and A. Miyamoto
Publication Date: 2009
Journal Name: Journal of Physical Chemistry C
Publisher: ACS
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